Wildlife, Fisheries, & Conservation Biology_Draft Recommendations for Field Work During the COVID-19 Pandemic

Draft copy of recommendations for field work during the COVID-19 pandemic, authored by Brian J. Olsen, Chair, Department of Wildlife, Fisheries & Conservation Biology, Interim Director of the Ecology and Environmental Sciences Program, and Associate Professor of Ornithology. In developing the recommendations Professor Olsen queried 100 University of Maine faculty members who conduct field research and collected comments from over two dozen. The guidelines were sent for review to Frederick Servello, Dean of the University of Maine College of Natural Sciences, Forestry, and Agriculture, and Director of the Maine Agricultural and Forest Experiment Station, Christopher Gerbi, Associate Dean for Research in the College of Natural Sciences, Forestry, and Agriculture, and Associate Director of the Maine Agricultural and Forest Experiment Station, and Mark Hutton, Associate Dean for Research in the College of Natural Sciences, Forestry, and Agriculture, and Associate Director of the Maine Agricultural and Forest Experiment Station

Book Review: \u3ci\u3eEffects of Climate Change on Birds\u3c/i\u3e, Edited by Anders Pape Meller, Wolfgang Fiedler, and Peter Berthold

Book review of Effects of Climate Change on Birds, edited by Anders Pape Meller, Wolfgang Fiedler, and Peter Berthold. Climate scientists from across the globe predict vast changes during the next century in the planet\u27s temperatures, precipitation, storm intensities, fire regimes, hydrologic cycles, and atmospheric, water, and soil chemistries. The changes will be global, but their effects will be felt locally everywhere. To find a scientifically and socially engaging bellwether of these events, we need to look only through the lens of avian biology. Birds are found from pole to pole; their movements connect continents. They are loud, colorful symbols of the changing of the seasons, and the body of work describing how changes to our climate are altering their evolution and ecology is growing nearly as quickly as the changes are occurring. Anders Meller, Wolfgang Fiedler, and Peter Berthold have put together a compilation of review papers on climate change as seen through that ornithological lens. In a text written for ecological professionals and graduate student study, the authors show the breadth of ways that birds illustrate the implications of climate change for wildlife, layout numerous needs to improve our predictive abilities, and provide some brief descriptions of the quantitative tools that might be used to answer those needs

Wildlife, Fisheries, & Conservation Biology_Ecology and Environmental Sciences Program_COVID-19 News

Email from Brian J. Olsen, Chair, Department of Wildlife, Fisheries & Conservation Biology, Interim Director of the Ecology and Environmental Sciences Program, and Associate Professor of Ornithology, University of Maine to students in the Ecology and Environmental Sciences Program (EES) with updates and information regarding the Program in response to the COVID-19 pandemic

Differential introgression and the maintenance of species boundaries in an advanced generation avian hybrid zone

Background: Evolutionary processes, including selection and differential fitness, shape the introgression of genetic material across a hybrid zone, resulting in the exchange of some genes but not others. Differential introgression of molecular or phenotypic markers can thus provide insight into factors contributing to reproductive isolation. We characterized patterns of genetic variation across a hybrid zone between two tidal marsh birds, Saltmarsh (Ammodramus caudacutus) and Nelson’s (A. nelsoni) sparrows (n = 286), and compared patterns of introgression among multiple genetic markers and phenotypic traits. Results: Geographic and genomic cline analyses revealed variable patterns of introgression among marker types. Most markers exhibited gradual clines and indicated that introgression exceeds the spatial extent of the previously documented hybrid zone. We found steeper clines, indicating strong selection for loci associated with traits related to tidal marsh adaptations, including for a marker linked to a gene region associated with metabolic functions, including an osmotic regulatory pathway, as well as for a marker related to melanin-based pigmentation, supporting an adaptive role of darker plumage (salt marsh melanism) in tidal marshes. Narrow clines at mitochondrial and sex-linked markers also offer support for Haldane’s rule. We detected patterns of asymmetrical introgression toward A. caudacutus, which may be driven by differences in mating strategy or differences in population density between the two species. Conclusions: Our findings offer insight into the dynamics of a hybrid zone traversing a unique environmental gradient and provide evidence for a role of ecological divergence in the maintenance of pure species boundaries despite ongoing gene flow

Differential introgression and the maintenance of species boundaries in an advanced generation avian hybrid zone

Background: Evolutionary processes, including selection and differential fitness, shape the introgression of genetic material across a hybrid zone, resulting in the exchange of some genes but not others. Differential introgression of molecular or phenotypic markers can thus provide insight into factors contributing to reproductive isolation. We characterized patterns of genetic variation across a hybrid zone between two tidal marsh birds, Saltmarsh (Ammodramus caudacutus) and Nelson’s (A. nelsoni) sparrows (n = 286), and compared patterns of introgression among multiple genetic markers and phenotypic traits. Results: Geographic and genomic cline analyses revealed variable patterns of introgression among marker types. Most markers exhibited gradual clines and indicated that introgression exceeds the spatial extent of the previously documented hybrid zone. We found steeper clines, indicating strong selection for loci associated with traits related to tidal marsh adaptations, including for a marker linked to a gene region associated with metabolic functions, including an osmotic regulatory pathway, as well as for a marker related to melanin-based pigmentation, supporting an adaptive role of darker plumage (salt marsh melanism) in tidal marshes. Narrow clines at mitochondrial and sex-linked markers also offer support for Haldane’s rule. We detected patterns of asymmetrical introgression toward A. caudacutus, which may be driven by differences in mating strategy or differences in population density between the two species. Conclusions: Our findings offer insight into the dynamics of a hybrid zone traversing a unique environmental gradient and provide evidence for a role of ecological divergence in the maintenance of pure species boundaries despite ongoing gene flow

Genotype-environment associations support a mosaic hybrid zone between two tidal marsh birds

Local environmental features can shape hybrid zone dynamics when hybrids are bounded by ecotones or when patchily distributed habitat types lead to a corresponding mosaic of genotypes. We investigated the role of marsh-level characteristics in shaping a hybrid zone between two recently diverged avian taxa – Saltmarsh (Ammodramus caudacutus) and Nelson\u27s (A. nelsoni) sparrows. These species occupy different niches where allopatric, with caudacutus restricted to coastal marshes and nelsoni found in a broader array of wetland and grassland habitats and co-occur in tidal marshes in sympatry. We determined the influence of habitat types on the distribution of pure and hybrid sparrows and assessed the degree of overlap in the ecological niche of each taxon. To do this, we sampled and genotyped 305 sparrows from 34 marshes across the hybrid zone and from adjacent regions. We used linear regression to test for associations between marsh characteristics and the distribution of pure and admixed sparrows. We found a positive correlation between genotype and environmental variables with a patchy distribution of genotypes and habitats across the hybrid zone. Ecological niche models suggest that the hybrid niche was more similar to that of A. nelsoni and habitat suitability was influenced strongly by distance from coastline. Our results support a mosaic model of hybrid zone maintenance, suggesting a role for local environmental features in shaping the distribution and frequency of pure species and hybrids across space

Genotype-environment associations support a mosaic hybrid zone between two tidal marsh birds

Local environmental features can shape hybrid zone dynamics when hybrids are bounded by ecotones or when patchily distributed habitat types lead to a corresponding mosaic of genotypes. We investigated the role of marsh-level characteristics in shaping a hybrid zone between two recently diverged avian taxa – Saltmarsh (Ammodramus caudacutus) and Nelson\u27s (A. nelsoni) sparrows. These species occupy different niches where allopatric, with caudacutus restricted to coastal marshes and nelsoni found in a broader array of wetland and grassland habitats and co-occur in tidal marshes in sympatry. We determined the influence of habitat types on the distribution of pure and hybrid sparrows and assessed the degree of overlap in the ecological niche of each taxon. To do this, we sampled and genotyped 305 sparrows from 34 marshes across the hybrid zone and from adjacent regions. We used linear regression to test for associations between marsh characteristics and the distribution of pure and admixed sparrows. We found a positive correlation between genotype and environmental variables with a patchy distribution of genotypes and habitats across the hybrid zone. Ecological niche models suggest that the hybrid niche was more similar to that of A. nelsoni and habitat suitability was influenced strongly by distance from coastline. Our results support a mosaic model of hybrid zone maintenance, suggesting a role for local environmental features in shaping the distribution and frequency of pure species and hybrids across space

Relationship of phenotypic variation and genetic admixture in the Saltmarsh–Nelson\u27s sparrow hybrid zone

Hybridization is influential in shaping species\u27 dynamics and has many evolutionary and conservation implications. Identification of hybrid individuals typically relies on morphological data, but the assumption that hybrids express intermediate traits is not always valid, because of complex patterns of introgression and selection. We characterized phenotypic and genotypic variation across a hybrid zone between 2 tidal-marsh birds, the Saltmarsh Sparrow (Ammodramus caudacutus) and Nelson\u27s Sparrow (A. nelsoni) (n = 290), and we sought to identify morphological traits that could be used to classify admixed individuals. Sparrows were sampled from a total of 34 marshes, including 23 sympatric and 11 putatively allopatric marshes. Each individual was scored at 13 plumage traits, and standard morphometric data were collected. We used genotyping analysis at 24 microsatellite loci to categorize individuals into genotypic classes of pure, F1–F2, or backcrossed. Genetic data revealed that 52% of individuals sampled along the geographic transect were of mixed ancestry, and the majority of these were backcrossed. Traits related to the definition of plumage features (streaking, crown, and face) showed less overlap between genotypic classes than traits related to the amount or color of plumage features. Although morphological data performed well in distinguishing between the 2 taxa, pure and backcrossed individuals of each parental type could not be distinguished because of substantial overlap in plumage and morphology. We conclude that the discrimination of pure and hybrid individuals is not possible in the absence of genetic data. Our results have implications for conservation of pure populations, as extensive backcrossing throughout the hybrid zone may present challenges for monitoring pure species identified by morphology alone

RAPID: Ecological Resistance of Multiply Stressed Populations: The Response of Tidal Marsh Birds and Plants to Hurricane Sandy

All animal and plant populations can weather change. However, the amount of environmental change a population can absorb is likely to depend upon other, past and ongoing stresses that the population experiences. This project will test whether the ability of populations of native plants and animals in coastal marshes to withstand the recent, extreme storm Hurricane Sandy was greater or less in marshes more subject to past stresses. Researchers will compare the abundances of marsh plants and animals before and after the storm and test whether vulnerability was greater in more specialized species or in marshes surrounded by development, invaded by introduced plants, or challenged by high rates of sea-level rise, and whether previous protection of areas from different kinds of development or use helped reduce vulnerability. By addressing these questions using current theories of ecosystem disturbance, the research will provide general insights on the effects of disturbance and stress on native species and habitats. This research also will provide a specific assessment of Hurricane Sandy\u27s impact on tidal marshes, a vital buffer against storm damage. This will help managers target specific marshes for conservation and restoration and improve the efficiency of planned federal restoration efforts. The work will also inform future coastal management planning by identifying which types of marshes are most vulnerable to future disturbances. Findings will be disseminated to local, state, and federal partners through the Saltmarsh Habitat and Avian Research Program, a cooperative consortium of universities, non-governmental organizations, and state and Federal agency partners working together to conserve tidal marsh habitats and the species they support (www.tidalmarshbirds.org). The project will also help train 20 field technicians

Algal Blooms in Arkansas Streams, Ponds, and Lakes

Did you know that algae are a natural part of ponds, lakes, streams, and rivers? These organisms grow in the water (plankton) and on rocks, plants, and other surfaces (periphyton) and sometimes periphyton slough off into the water (seston). Most of the time these algae are hardly noticeable in waterbodies; however, sometimes they can form very noticeable algal blooms